Sorry if I chose the wrong board to post this. I configured the Applications tab of the Patch My PC Publish Settings app and everything went smoothly as far as I can tell.
I went ahead and ran the publishing service sync and it failed to create the applications. Everything else such as downloading and publishing updates to WSUS works with no issue.
In the logs, I see the following:
"An error occurred while reporting: Unable to find the Assembly: AdminUI.WqlQueryEngine, Version=5.0.0.0, Culture=neutral, PublicKeyToken=31bf3856ad364e35
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The SCCM administration console was not found on this server. Unable to publish applications in SCCM."
However, I do have the SCCM console installed in all default directories on our WSUS server. Is there something simple here that I'm missing?